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Genome-wide meta-analysis identifies eight new susceptibility loci for cutaneous squamous cell carcinoma

Author(s): Sarin KY; Wu W; Asgari MM; Han J; et al.

Nat Commun. 2020 Feb 10;11(1):820. Epub 2020-02-10.

PubMed abstract

Reproductive Factors and Mammographic Density: Associations Among 24,840 Women and Comparison of Studies Using Digitized Film-Screen Mammography and Full-Field Digital Mammography

Author(s): Alexeeff SE; Habel LA; et al.

Am J Epidemiol. 2019 06 01;188(6):1144-1154.

PubMed abstract

A Large Multi-ethnic Genome-Wide Association Study of Adult Body Mass Index Identifies Novel Loci

Author(s): Hoffmann TJ; Choquet H; Yin J; Banda Y; Kvale MN; Glymour M; Schaefer C; Risch N; Jorgenson E

Genetics. 2018 10;210(2):499-515. Epub 2018-08-14.

PubMed abstract

Characterization of Statin Low-Density Lipoprotein Cholesterol Dose-Response Using Electronic Health Records in a Large Population-Based Cohort

Author(s): Oni-Orisan A; Hoffmann TJ; Ranatunga D; Medina MW; Jorgenson E; Schaefer C; Krauss RM; Iribarren C; Risch N

Circ Genom Precis Med. 2018 Sep;11(9):e002043.

PubMed abstract

Incorporating machine learning approaches to assess putative environmental risk factors for multiple sclerosis

Author(s): Mowry EM; Hedström AK; Gianfrancesco MA; Shao X; Schaefer CA; Shen L; Bellesis KH; Briggs FBS; Olsson T; Alfredsson L; Barcellos LF

Mult Scler Relat Disord. 2018 Aug;24:135-141. Epub 2018-06-23.

PubMed abstract

A multiethnic genome-wide association study of primary open-angle glaucoma identifies novel risk loci

Author(s): Choquet H; Melles RB; John SWM; Jorgenson E; et al.

Nat Commun. 2018 06 11;9(1):2278. Epub 2018-06-11.

PubMed abstract

Genetic variants in the HLA class II region associated with risk of cutaneous squamous cell carcinoma

Author(s): Wang W; Ollila HM; Whittemore AS; Demehri S; Ioannidis NM; Jorgenson E; Mignot E; Asgari MM

Cancer Immunol Immunother. 2018 May 12.

PubMed abstract

Genetic contributors to variation in alcohol consumption vary by race/ethnicity in a large multi-ethnic genome-wide association study

Author(s): Jorgenson E; Thai KK; Hoffmann TJ; Sakoda LC; Kvale MN; Banda Y; Schaefer C; Risch N; Mertens J; Weisner C; Choquet H

Mol Psychiatry. 2017 Sep;22(9):1359-1367. Epub 2017-05-09.

PubMed abstract

Age at menarche and late adolescent adiposity associated with mammographic density on processed digital mammograms in 24,840 women

Author(s): Alexeeff SE; Habel LA; et al.

Cancer Epidemiol Biomarkers Prev. 2017 Sep;26(9):1450-1458. Epub 2017-07-11.

PubMed abstract

A Genetic Marker Associated with Shoulder Dislocation

Author(s): Kim S; Kleimeyer JP; Ahmed MA; Avins AL; Fredericson M; Dragoo JL; Ioannidis JPA

Int J Sports Med. 2017 Jul;38(7):508-514. Epub 2017-05-18.

PubMed abstract

Two Genetic Loci associated with Medial Collateral Ligament Injury

Author(s): Roos AK; Avins AL; Ahmed MA; Kleimeyer JP; Roos TR; Fredericson M; Ioannidis JPA; Dragoo JL; Kim S

Int J Sports Med. 2017 Jul;38(7):501-507. Epub 2017-05-08.

PubMed abstract

Variants in Pharmacokinetic Transporters and Glycaemic Response to Metformin: A MetGen Meta-Analysis

Author(s): Dujic T; van der Heijden AA; Pearson ER; et al.

Clin Pharmacol Ther. 2017 Jun;101(6):763-772. Epub 2017-02-03.

PubMed abstract

Evidence for a causal relationship between low vitamin D, high BMI, and pediatric-onset MS

Author(s): Gianfrancesco MA; Barcellos LF; Waubant E; Network of Pediatric Multiple Sclerosis Centers; et al.

Neurology. 2017 Apr 25;88(17):1623-1629. Epub 2017-03-29.

PubMed abstract

Causal Effect of Genetic Variants Associated With Body Mass Index on Multiple Sclerosis Susceptibility

Author(s): Gianfrancesco MA; Alfredsson L; Barcellos LF; et al.

Am J Epidemiol. 2017 02 01;185(3):162-171.

PubMed abstract

Genome-wide association study of prostate-specific antigen levels identifies novel loci independent of prostate cancer

Author(s): Hoffmann TJ; Jorgenson E; Shan J; Chao CR; Risch N; Van Den Eeden SK; Witte JS; Witte JS; et al.

Nat Commun. 2017 Jan 31;8:14248. Epub 2017-01-31.

PubMed abstract

Genome-wide association analyses using electronic health records identify new loci influencing blood pressure variation

Author(s): Hoffmann TJ; Ehret GB; Nandakumar P; Ranatunga D; Schaefer C; Kwok PY; Iribarren C; Chakravarti A; Risch N

Nat Genet. 2017 Jan;49(1):54-64. Epub 2016-11-14.

PubMed abstract

Genome-wide association screens for Achilles tendon and ACL tears and tendinopathy

Author(s): Kim SK; Roos TR; Roos AK; Kleimeyer JP; Ahmed MA; Goodlin GT; Fredericson M; Ioannidis JP; Avins AL; Dragoo JL

PLoS ONE. 2017;12(3):e0170422. Epub 2017-03-30.

PubMed abstract

Genome-Wide Association Study Identifies African-Specific Susceptibility Loci in African Americans With Inflammatory Bowel Disease

Author(s): Brant SR; Klapproth JA; Kugathasan S; et al.

Gastroenterology. 2017 01;152(1):206-217.e2. Epub 2016-09-28.

PubMed abstract

Genome-wide analysis identifies 12 loci influencing human reproductive behavior

Author(s): Barban N; Guo X; Mills MC; et al.

Nat Genet. 2016 Dec;48(12):1462-1472. Epub 2016-10-31.

PubMed abstract

Clinical Utility of Multi-marker Genetic Risk Scores for Prediction of Incident Coronary Heart Disease: A Cohort Study among over 51 Thousand Individuals of European Ancestry

Author(s): Iribarren C; Lu M; Jorgenson E; Martínez M; Lluis-Ganella C; Subirana I; Salas E; Elosua R

Circ Cardiovasc Genet. 2016 Dec;9(6):531-540. Epub 2016-10-25.

PubMed abstract

The Kaiser Permanente Northern California research program on genes, environment, and health (RPGEH) pregnancy cohort: study design, methodology and baseline characteristics

Author(s): Hedderson MM; Avalos LA; Van den Eeden SK; Gunderson EP; Li DK; Altschuler A; Croen LA; Croen LA; et al.

BMC Pregnancy Childbirth. 2016 Nov 29;16(1):381. Epub 2016-11-29.

PubMed abstract

A Longitudinal HbA1c Model Elucidates Genes Linked to Disease Progression on Metformin

Author(s): Goswami S; Giacomini KM; Savic RM; et al.

Clin Pharmacol Ther. 2016 Nov;100(5):537-547. Epub 2016-09-23.

PubMed abstract

Mendelian randomization shows a causal effect of low vitamin D on multiple sclerosis risk

Author(s): Rhead B; Link J; Barcellos LF; et al.

Neurol Genet. 2016 Oct;2(5):e97. Epub 2016-09-13.

PubMed abstract

A Large Genome-Wide Association Study of Age-Related Hearing Impairment Using Electronic Health Records

Author(s): Hoffmann TJ; Keats BJ; Yoshikawa N; Schaefer C; Risch N; Lustig LR

PLoS Genet. 2016 Oct;12(10):e1006371. Epub 2016-10-20.

PubMed abstract

Variation in the glucose transporter gene SLC2A2 is associated with glycemic response to metformin

Author(s): Zhou K; Palmer CNA; Pearson ER; et al.

Nat Genet. 2016 Sep;48(9):1055-1059. Epub 2016-08-08.

PubMed abstract

The Association of Refractive Error with Glaucoma in a Multiethnic Population

Author(s): Shen L; Melles RB; Metlapally R; Barcellos L; Schaefer C; Risch N; Herrinton LJ; Wildsoet C; Jorgenson E

Ophthalmology. 2015 Aug 7.

PubMed abstract

Common coding variants in the HLA-DQB1 region confer susceptibility to age-related macular degeneration

Author(s): Jorgenson E; Melles RB; Hoffmann TJ; Jia X; Sakoda LC; Kvale MN; Banda Y; Schaefer C; Risch N; Shen L

Eur J Hum Genet. 2016 Jul;24(7):1049-55. Epub 2016-01-06.

PubMed abstract

Case-control study of mammographic density and breast cancer risk using processed digital mammograms

Author(s): Habel LA; Lipson JA; Achacoso N; Rothstein JH; Yaffe MJ; Liang RY; Acton L; McGuire V; Whittemore AS; Rubin DL; Sieh W

Breast Cancer Res. 2016 May 21;18(1):53. Epub 2016-05-21.

PubMed abstract

Identification of Susceptibility Loci for Cutaneous Squamous Cell Carcinoma

Author(s): Asgari MM; Wang W; Ioannidis NM; Itnyre J; Hoffmann T; Jorgenson E; Whittemore AS

J Invest Dermatol. 2016 May;136(5):930-7. Epub 2016-01-29.

PubMed abstract

Diabetes Pathology and Risk of Primary Open-Angle Glaucoma: Evaluating Causal Mechanisms by Using Genetic Information

Author(s): Shen L; Walter S; Melles RB; Glymour MM; Jorgenson E

Am J Epidemiol. 2015 Nov 25.

PubMed abstract

Polymorphisms In HLA Class II Genes Are Associated With Susceptibility To Staphylococcus aureus Infection In A Caucasian Population

Author(s): DeLorenze GN; Nelson CL; Scott WK; Allen AS; Ray GT; Tsai AL; Quesenberry CP; Fowler VG

J Infect Dis. 2015 Oct 8.

PubMed abstract

A large multi-ethnic genome-wide association study of prostate cancer identifies novel risk variants and substantial ethnic differences

Author(s): Hoffmann TJ; Sakoda LC; Jorgenson E; Graff RE; Aaronson D; Risch N; Witte JS; et al.

Cancer Discov. 2015 Aug;5(8):878-91. Epub 2015-06-01.

PubMed abstract

Genotyping Informatics and Quality Control for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort

Author(s): Kvale MN; Dispensa BP; Jorgenson E; Lao R; Ranatunga D; Shapero M; Walter L; Wong S; Kwok PY; Risch N; et al.

Genetics. 2015 Aug;200(4):1051-60. Epub 2015-06-19.

PubMed abstract

Automated Assay of Telomere Length Measurement and Informatics for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort

Author(s): Lapham K; Dispensa BP; Jorgenson E; Ludwig D; Rowell S; Smethurst D; Walter L; Kwok PY; Schaefer C; Blackburn EH; Blackburn EH; et al.

Genetics. 2015 Aug;200(4):1061-72. Epub 2015-06-19.

PubMed abstract

Characterizing Race/Ethnicity and Genetic Ancestry for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort

Author(s): Banda Y; Dispensa BP; Jorgenson E; Ludwig D; Rowell S; Sciortino S; Walter L; Kwok PY; Risch N; Risch N; et al.

Genetics. 2015 Aug;200(4):1285-95. Epub 2015-06-19.

PubMed abstract

Differences in the Genetic Susceptibility to Age-Related Macular Degeneration Clinical Subtypes

Author(s): Shen L; Hoffmann TJ; Melles RB; Sakoda LC; Kvale MN; Banda Y; Schaefer C; Risch N; Jorgenson E

Invest Ophthalmol Vis Sci. 2015 Jul;56(8):4290-9.

PubMed abstract

Genome-wide association study identifies ABCG2 (BCRP) as an allopurinol transporter and a determinant of drug response

Author(s): Wen CC; Yee SW; Liang X; Hoffmann TJ; Kvale MN; Banda Y; Jorgenson E; Schaefer C; Risch N; Giacomini KM

Clin Pharmacol Ther. 2015 May;97(5):518-25. Epub 2015-04-06.

PubMed abstract

Imputation of the Rare HOXB13 G84E Mutation and Cancer Risk in a Large Population-Based Cohort

Author(s): Hoffmann TJ; Shen L; Liu J; Banda Y; Kushi LH; Quesenberry CP; Schaefer C; Van Den Eeden SK; Risch N; Witte JS; Witte JS; et al.

PLoS Genet. 2015 Jan;11(1):e1004930. Epub 2015-01-28.

PubMed abstract

A genome-wide association study identifies four novel susceptibility loci underlying inguinal hernia

Author(s): Jorgenson E; Makki N; Shen L; Chen DC; Tian C; Eckalbar WL; Hinds D; Ahituv N; Avins A

Nat Commun. 2015;6:10130. Epub 2015-12-21.

PubMed abstract

Estimating genotype error rates from high-coverage next-generation sequence data

Author(s): Wall JD; Tang LF; Zerbe B; Kvale MN; Kwok PY; Schaefer C; Risch N

Genome Res. 2014 Nov;24(11):1734-9. Epub 2014-10-10.

PubMed abstract

Impact of type 2 diabetes on lower urinary tract symptoms in men: a cohort study

Author(s): Van Den Eeden SK; Ferrara A; Shan J; Jacobsen SJ; Quinn VP; Haque R; Quesenberry CP

BMC Urol. 2013 Feb 20;13:12.

PubMed abstract

Evaluating Racial/Ethnic Disparities in Lower Urinary Tract Symptoms in Men

Author(s): Van Den Eeden SK; Shan J; Jacobsen SJ; Aaronsen D; Haque R; Quinn VP; Quesenberry CP Jr; Urologic Diseases in America Project

J Urol. 2012 Jan;187(1):185-9. Epub 2011 Nov 17.

PubMed abstract

Design and coverage of high throughput genotyping arrays optimized for individuals of East Asian, African American, and Latino race/ethnicity using imputation and a novel hybrid SNP selection algorithm

Author(s): Hoffmann TJ; Lu Y; Rowell S; Walter L; Finn A; Kwok PY; Risch N; et al.

Genomics. 2011 Dec;98(6):422-30. Epub 2011 Aug 28.

PubMed abstract

​Is rigorous retrospective harmonization possible? Application of the DataSHaPER approach across 53 large studies.

Author(s): Fortier I; Doiron D; Little J; Ferretti V; L'Heureux F; Stolk RP; Knoppers BM; Hudson TJ; Burton PR; International Harmonization Initiative;

​Int J Epidemiol. 2011 Oct;40(5):1314-28. doi: 10.1093/ije/dyr106. Epub 2011 Jul 30.

PubMed abstract

Next generation genome-wide association tool: design and coverage of a high-throughput European-optimized SNP array

Author(s): Hoffmann TJ; Kaufman J; Ranatunga D; Walter L; Williams A; Kwok PY; Risch N; et al.

Genomics. 2011 Aug;98(2):79-89. Epub 2011 Apr 30.

PubMed abstract